STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06157Conserved hypothetical protein. (309 aa)    
Predicted Functional Partners:
HCH_06156
Conserved hypothetical protein.
 
 
 0.994
HCH_06153
Type II secretory pathway, component PulD; COG1450.
 
  
 0.960
HCH_06155
Conserved hypothetical protein.
 
   
 0.958
HCH_06150
FOG: TPR repeat; COG0457.
 
     0.943
pilN
Tfp pilus assembly protein PilN; COG3166.
 
 
 0.907
HCH_06146
Type II secretory pathway, pseudopilin PulG; COG2165.
 
   
 0.894
HCH_06143
Conserved hypothetical protein.
 
   
 0.888
HCH_06152
Type II secretory pathway, component ExeA (predicted ATPase); COG3267.
 
    0.888
HCH_06142
Conserved hypothetical protein.
 
   
 0.887
HCH_06141
Conserved hypothetical protein.
 
   
 0.868
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.