STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06301Membrane protein related to metalloendopeptidase; COG0739. (297 aa)    
Predicted Functional Partners:
HCH_01351
Membrane-bound metallopeptidase; COG4942.
 
   
 0.767
HCH_01876
Membrane protein related to metalloendopeptidase; COG0739.
  
     0.758
HCH_01708
Membrane protein related to metalloendopeptidase; COG0739.
  
   
 0.718
HCH_05221
Membrane protein related to metalloendopeptidase; COG0739.
  
   
 0.688
HCH_05387
N-acetylmuramoyl-L-alanine amidase; COG0860.
 
  
 0.510
HCH_06302
Uncharacterized conserved protein; COG1723.
       0.491
HCH_06951
Membrane protein related to metalloendopeptidase; COG0739.
  
   
 0.422
HCH_00574
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.409
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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