STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06320NAD-dependent aldehyde dehydrogenase; COG1012; Belongs to the aldehyde dehydrogenase family. (462 aa)    
Predicted Functional Partners:
HCH_06318
Alcohol dehydrogenase, class IV; COG1454.
 
 0.902
HCH_06321
Glutamine synthetase; COG0174; Belongs to the glutamine synthetase family.
 
  
 0.875
HCH_00731
Glutamine synthetase; COG0174; Belongs to the glutamine synthetase family.
 
  
 0.710
HCH_02501
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; COG0318.
  
 
 0.705
HCH_06317
GMP synthase - Glutamine amidotransferase domain; COG0518.
 
   
 0.664
HCH_05072
Na+/proline symporter; COG0591.
  
 
 0.576
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.524
HCH_05767
Uncharacterized enzyme involved in inositol metabolism; COG3718.
  
  
 0.519
iolD
Acetolactate synthase; COG3962; Belongs to the TPP enzyme family.
 
  
 0.486
HCH_02963
Polyketide synthase modules and related protein; COG3321.
  
  
 0.485
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.