STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06368Predicted ATPase with chaperone activity; COG0606. (166 aa)    
Predicted Functional Partners:
HCH_06394
Predicted ATPase with chaperone activity; COG0606.
 
     0.976
HCH_05372
Predicted amidophosphoribosyltransferase; COG1040.
 
  
 0.855
HCH_00032
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; COG0758.
 
 
 0.841
HCH_10004
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; COG0758.
 
 
 0.830
HCH_05895
Predicted endonuclease distantly related to archaeal Holliday junction resolvase; COG0792; Belongs to the UPF0102 family.
 
  
 0.788
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.588
HCH_02699
DNA internalization-related competence protein ComEC/Rec2; TIGRFAMsMatches:TIGR00361.
 
  
 0.569
HCH_04086
Flagellar basal body rod protein; COG4786.
   
   0.540
flgK
Flagellar hook-associated protein; COG1256; Belongs to the flagella basal body rod proteins family.
  
  
 0.485
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.