STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (366 aa)    
Predicted Functional Partners:
cobK
Precorrin-6x reductase; COG2099.
 
 0.999
cbiG
Cobalamin biosynthesis protein CbiG; COG2073.
 
 
 0.999
cobH
Precorrin isomerase; COG2082.
  
 0.997
cobL
precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAMsMatches:TIGR01468.
  
 0.997
cobM
Precorrin-4 C11-methyltransferase; TIGRFAMsMatches:TIGR01465; Belongs to the precorrin methyltransferase family.
 
  
 0.991
cobI
Precorrin-2 C20-methyltransferase; TIGRFAMsMatches:TIGR01467; Belongs to the precorrin methyltransferase family.
 
  
 0.986
cobJ
Precorrin-3B methylase; COG1010.
 
  
 0.984
cbiA
Cobyrinic acid a,c-diamide synthase; COG1797.
 
  
 0.977
HCH_06472
Uncharacterized conserved protein; COG2138.
 
   
 0.961
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.934
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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