STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06688Spermidine/putrescine-binding periplasmic protein; COG0687. (356 aa)    
Predicted Functional Partners:
HCH_02207
ABC-type spermidine/putrescine transport system, permease component II; COG1177.
 
 0.997
HCH_02208
ABC-type spermidine/putrescine transport system, permease component I; COG1176.
 
 0.982
HCH_01473
ABC-type spermidine/putrescine transport system, permease component I; COG1176.
 
 0.981
HCH_01474
ABC-type spermidine/putrescine transport system, permease component II; COG1177.
 
 0.981
potA-2
ABC-type spermidine/putrescine transport system, ATPase components; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.975
potA
ABC-type spermidine/putrescine transport system, ATPase components; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.974
HCH_06689
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG5001.
       0.773
HCH_03087
ABC-type spermidine/putrescine transport system, ATPase components; COG3842; Belongs to the ABC transporter superfamily.
  
 0.689
HCH_01761
ABC-type spermidine/putrescine transport system, ATPase components; COG3842; Belongs to the ABC transporter superfamily.
  
 0.653
HCH_06691
Ca2+/Na+ antiporter; COG0530.
       0.565
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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