STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06843Bacterioferritin-associated ferredoxin; COG2906. (81 aa)    
Predicted Functional Partners:
bfr2
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.935
bfr1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.877
HCH_00183
Uncharacterized iron-regulated protein; COG3487.
  
  
 0.605
HCH_05987
Conserved hypothetical protein.
  
  
 0.605
HCH_06845
Conserved hypothetical protein.
       0.496
HCH_00548
Periplasmic protein TonB, links inner and outer membranes; COG0810.
  
  
 0.478
HCH_06827
Periplasmic protein TonB, links inner and outer membranes; COG0810.
  
  
 0.478
tonB
Periplasmic protein TonB, links inner and outer membranes; COG0810.
  
  
 0.478
HCH_06846
Conserved hypothetical protein.
     
 0.458
HCH_06847
Conserved hypothetical protein.
       0.438
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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