STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_06963Transcriptional regulator of sugar metabolism; COG1349. (258 aa)    
Predicted Functional Partners:
HCH_06964
Glycerol-3-phosphate dehydrogenase; COG0578; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.834
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.769
HCH_01298
Mannitol-1-phosphate/altronate dehydrogenase; COG0246.
  
  
 0.661
HCH_05767
Uncharacterized enzyme involved in inositol metabolism; COG3718.
  
  
 0.637
glpD
Glycerol-3-phosphate dehydrogenase; COG0578.
 
  
 0.601
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAMsMatches:TIGR01419.
 
  
 0.573
HCH_04193
Glycerol-3-phosphate dehydrogenase; COG0578.
 
  
 0.553
HCH_04815
Acyl-CoA synthetase (NDP forming); COG1042.
   
   0.541
HCH_03485
Polyketide synthase modules and related protein; COG3321.
  
  
 0.529
HCH_06962
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
       0.523
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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