STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amuc_0200TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sth:STH1188 putative lactoylglutathione lyase. (140 aa)    
Predicted Functional Partners:
Amuc_0201
PFAM: carboxyl transferase; KEGG: rru:Rru_A0051 carboxyl transferase.
 
 
 0.993
Amuc_1984
PFAM: methylmalonyl-CoA mutase; KEGG: rca:Rcas_3871 methylmalonyl-CoA mutase, large subunit.
 
  
 0.989
Amuc_1983
methylmalonyl-CoA mutase, large subunit; KEGG: ppd:Ppro_1284 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
  
 0.987
Amuc_2020
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: cau:Caur_2507 LAO/AO transport system ATPase.
   
 0.930
Amuc_0202
Hypothetical protein.
       0.628
Amuc_0199
KEGG: sus:Acid_7234 hypothetical protein.
  
    0.518
Amuc_0204
KEGG: csc:Csac_2482 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit.
 
     0.514
Amuc_2034
Methylmalonyl-CoA carboxytransferase; PFAM: pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: mja:MJ1231 pyruvate carboxylase subunit B.
    
  0.513
Amuc_0203
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rru:Rru_A0049 biotin/lipoyl attachment.
  
  
 0.507
Amuc_2066
PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase_; KEGG: pcu:pc0033 putative bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family.
  
  
 0.464
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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