STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amuc_1544PFAM: lipolytic protein G-D-S-L family; KEGG: xac:XAC1564 acetylhydrolase. (260 aa)    
Predicted Functional Partners:
Amuc_0641
KEGG: mmw:Mmwyl1_0670 lipolytic protein G-D-S-L family.
  
     0.775
Amuc_1545
Hypothetical protein.
       0.628
Amuc_1259
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_2651 putative O-antigen related protein.
 
     0.620
Amuc_1546
PFAM: lipolytic protein G-D-S-L family; KEGG: bfr:BF2190 putative acetylhydrolase.
 
    
0.584
Amuc_0454
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: bfs:BF1809 sialate O-acetylesterase.
 
     0.511
Amuc_0625
Exo-alpha-sialidase; KEGG: rba:RB3353 sialidase [precursor].
 
     0.511
Amuc_1424
Major facilitator superfamily MFS_1; PFAM: Kelch repeat-containing protein; Kelch repeat protein; major facilitator superfamily MFS_1; KEGG: pdi:BDI_2943 major facilitator family transporter.
 
     0.498
Amuc_1425
PFAM: Kelch repeat-containing protein; KEGG: rba:RB3349 conserved hypothetical protein-putative sodium:solute symporter.
 
     0.487
Amuc_0516
KEGG: pdi:BDI_1342 hypothetical protein.
  
     0.464
Amuc_1707
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bfr:BF0382 hypothetical protein.
  
     0.444
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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