STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amuc_2018Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: bth:BT_4681 beta-hexosaminidase precursor. (493 aa)    
Predicted Functional Partners:
Amuc_1699
PFAM: aminoglycoside phosphotransferase; KEGG: sat:SYN_02902 predicted phosphotransferase related to Ser/Thr protein kinases.
     
  0.900
Amuc_1947
PFAM: N-acylglucosamine 2-epimerase; KEGG: rba:RB3348 N-acylglucosamine 2-epimerase.
    
  0.900
Amuc_2019
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: bth:BT_4681 beta-hexosaminidase precursor.
 
   
0.665
Amuc_2020
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: cau:Caur_2507 LAO/AO transport system ATPase.
       0.613
Amuc_0392
PFAM: coagulation factor 5/8 type domain protein; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: fjo:Fjoh_2028 alpha-L-fucosidase.
  
 0.505
Amuc_0146
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: hau:Haur_0019 alpha-L-fucosidase.
  
 0.487
Amuc_0010
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: cpy:Cphy_3023 alpha-L-fucosidase.
  
 0.477
Amuc_0846
PFAM: coagulation factor 5/8 type domain protein; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: fjo:Fjoh_2028 alpha-L-fucosidase.
 
  
 0.442
Amuc_2136
PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: cpe:CPE1364 beta-N-acetylhexosaminidase.
  
   
0.418
Amuc_1815
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: pdi:BDI_2947 glycoside hydrolase family 20.
  
   
0.416
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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