STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amuc_2086Hypothetical protein; KEGG: bca:BCE_5389 O-antigen polymerase (wzy). (379 aa)    
Predicted Functional Partners:
Amuc_2088
PFAM: glycosyl transferase group 1; KEGG: fph:Fphi_1267 glycosyltransferase-like protein.
  
  
 0.790
Amuc_2089
PFAM: glycosyl transferase group 1; KEGG: gur:Gura_1688 glycosyl transferase, group 1.
  
  
 0.790
Amuc_2090
PFAM: glycosyl transferase group 1; KEGG: bth:BT_1352 putative glycosyltransferase.
  
  
 0.790
Amuc_2087
Hypothetical protein; KEGG: tel:tlr2316 probable fucosyl transferase.
       0.777
Amuc_2091
Hypothetical protein.
       0.689
Amuc_2084
PFAM: glycosyl transferase group 1; KEGG: bvu:BVU_3971 glycosyltransferase family 4.
  
  
 0.666
Amuc_2085
KEGG: rsh:Rsph17029_3414 hypothetical protein.
  
  
 0.666
Amuc_2093
PFAM: glycosyl transferase family 2; KEGG: eli:ELI_12220 SpsA-like protein.
  
  
 0.604
Amuc_2080
PFAM: sugar transferase; KEGG: gfo:GFO_1988 exopolysaccharide production related sugar transferase.
  
  
 0.597
Amuc_2092
PFAM: transferase hexapeptide repeat containing protein; KEGG: atc:AGR_L_141 putative acetyltransferase.
  
    0.596
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.