STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_0046KEGG: mva:Mvan_0872 conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
Mflv_1167
PFAM: cutinase; KEGG: mva:Mvan_5642 cutinase.
  
     0.720
Mflv_0229
KEGG: mva:Mvan_0676 conserved hypothetical protein.
  
     0.718
Mflv_1129
KEGG: mva:Mvan_5677 conserved hypothetical protein.
  
     0.718
Mflv_2067
KEGG: mmc:Mmcs_4120 hypothetical protein.
  
     0.695
Mflv_3664
KEGG: mmc:Mmcs_2450 hypothetical protein.
  
     0.695
Mflv_0047
KEGG: mva:Mvan_0871 hypothetical protein.
  
    0.683
Mflv_1163
KEGG: mva:Mvan_5646 conserved hypothetical protein.
  
   
 0.677
Mflv_1175
PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5630 cell wall arabinan synthesis protein.
  
     0.670
Mflv_0455
KEGG: mva:Mvan_0197 conserved hypothetical protein.
  
     0.657
Mflv_1173
PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5632 cell wall arabinan synthesis protein.
  
     0.655
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.