STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_0281PFAM: YibE/F family protein; KEGG: mva:Mvan_0617 YibE/F family protein. (413 aa)    
Predicted Functional Partners:
Mflv_0284
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mkm:Mkms_0447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
       0.649
Mflv_0283
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: msm:MSMEG_0685 oxidoreductase, molybdopterin-binding subunit.
       0.641
Mflv_0282
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: msm:MSMEG_0686 oxidoreductase.
       0.640
Mflv_1114
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mva:Mvan_5698 glutamate synthase (ferredoxin).
       0.581
Mflv_3593
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mva:Mvan_2822 glutamate synthase (ferredoxin).
       0.581
Mflv_0280
Hypothetical protein.
       0.557
Mflv_4053
KEGG: mmc:Mmcs_2068 hypothetical protein.
  
     0.539
Mflv_0223
PFAM: regulatory protein, MarR; KEGG: mva:Mvan_0684 transcriptional regulator, MarR family.
  
     0.530
Mflv_5187
PFAM: VanW family protein; KEGG: mva:Mvan_1124 VanW family protein.
  
     0.432
Mflv_3584
PFAM: protein of unknown function DUF308, membrane; KEGG: mpa:MAP1317c hypothetical protein.
      
 0.400
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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