STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_0512KEGG: mva:Mvan_0156 FAD linked oxidase domain protein. (56 aa)    
Predicted Functional Partners:
Mflv_0511
KEGG: mva:Mvan_0157 conserved hypothetical protein.
       0.773
Mflv_0510
KEGG: mva:Mvan_0158 conserved hypothetical protein.
       0.693
Mflv_0509
PFAM: cyclase/dehydrase; KEGG: mkm:Mkms_4586 cyclase/dehydrase.
       0.653
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.