STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_1057PFAM: HNH endonuclease; protein of unknown function DUF222; KEGG: mav:MAV_0536 hypothetical protein. (567 aa)    
Predicted Functional Partners:
Mflv_4397
PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222.
  
  
 0.733
Mflv_3477
PFAM: protein of unknown function DUF222; KEGG: mmc:Mmcs_4351 protein of unknown function DUF222.
  
  
 0.732
Mflv_1835
PFAM: protein of unknown function DUF222; KEGG: mva:Mvan_4912 protein of unknown function DUF222.
  
  
 0.700
Mflv_4014
PFAM: protein of unknown function DUF222; KEGG: mva:Mvan_3379 protein of unknown function DUF222.
  
  
 0.697
Mflv_1988
PFAM: HNH endonuclease; protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mmc:Mmcs_5006 protein of unknown function DUF222.
  
    0.604
Mflv_2147
PFAM: HhH-GPD family protein; KEGG: mmc:Mmcs_4049 HhH-GPD.
  
     0.599
Mflv_1474
KEGG: mmc:Mmcs_4699 hypothetical protein.
  
     0.595
Mflv_3750
SMART: HNH nuclease; KEGG: mmc:Mmcs_4699 hypothetical protein.
  
     0.591
Mflv_1056
PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: rha:RHA1_ro00013 transposase.
       0.550
Mflv_4772
KEGG: mmc:Mmcs_0947 hypothetical protein.
  
     0.498
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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