STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_1914TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmc:Mmcs_4442 diguanylate cyclase. (364 aa)    
Predicted Functional Partners:
Mflv_4571
Diguanylate phosphodiesterase; PFAM: EAL domain protein; GAF domain protein; KEGG: art:Arth_1771 diguanylate phosphodiesterase.
 
  
 0.878
Mflv_1320
PFAM: EAL domain protein; KEGG: mva:Mvan_1667 diguanylate phosphodiesterase.
 
 
 0.874
Mflv_1781
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: nfa:nfa1410 hypothetical protein.
 
  
 0.858
Mflv_1000
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: ana:alr1121 two-component hybrid sensor and regulator.
  
 
 0.781
Mflv_4521
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein.
 
 
 0.764
Mflv_4423
KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein.
  
 
 0.724
Mflv_5233
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: mpa:MAP0130 hypothetical protein.
  
 
 0.724
Mflv_1913
KEGG: bur:Bcep18194_B1171 hypothetical protein.
       0.721
Mflv_1911
PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0744c probable oxidoreductase.
       0.656
Mflv_1912
PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0745c putative 4-carboxymuconolactone decarboxylase.
       0.656
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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