STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_2970Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (159 aa)    
Predicted Functional Partners:
Mflv_2969
KEGG: mmc:Mmcs_3275 hypothetical protein.
       0.893
Mflv_2971
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: mmc:Mmcs_3273 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; Belongs to the class-II DAHP synthase family.
     
 0.810
Mflv_3987
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: mmc:Mmcs_2126 phage shock protein A, PspA.
  
     0.773
Mflv_1860
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: mva:Mvan_4874 chorismate mutase.
  
     0.772
Mflv_3546
KEGG: mpa:MAP1342c hypothetical protein.
  
     0.766
Mflv_2363
KEGG: mmc:Mmcs_3840 lipoprotein, putative.
  
     0.765
Mflv_2575
KEGG: mva:Mvan_4061 conserved hypothetical protein.
  
     0.757
Mflv_1421
KEGG: mpa:MAP0453 hypothetical protein.
  
     0.752
Mflv_4910
KEGG: mmc:Mmcs_1166 hypothetical protein.
  
     0.735
Mflv_4840
KEGG: mmc:Mmcs_1234 hypothetical protein.
  
     0.731
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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