Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mflv_3203KEGG: sco:SCO5331 DNA methylase. (1189 aa)    
Predicted Functional Partners:
Mflv_3202
KEGG: pna:Pnap_4280 putative phage resistance protein.
 
    0.972
Mflv_3204
PFAM: protein kinase; NERD domain protein; SMART: serine/threonine protein kinase; KEGG: fra:Francci3_2952 serine/threonine protein kinase.
 
   
 0.956
Mflv_3200
KEGG: sco:SCO6639 ATP/GTP binding protein.
 
     0.955
Mflv_3201
PFAM: PglZ domain; KEGG: fra:Francci3_2955 bacteriophage (phiC31) resistance gene PglZ.
 
     0.955
Mflv_3199
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sco:SCO6640 putative ATP-dependent helicase.
 
     0.950
Mflv_3198
PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: cpf:CPF_0992 McrB domain protein.
  
  
 0.840
Mflv_0804
PFAM: restriction modification system DNA specificity domain; KEGG: abo:ABO_1829 type I restriction-modification system, S subunit.
  
 
 0.832
Mflv_2409
PFAM: restriction modification system DNA specificity domain; KEGG: fra:Francci3_4012 restriction modification system DNA specificity domain.
  
 
 0.832
Mflv_3197
KEGG: fra:Francci3_2839 McrBC 5-methylcytosine restriction system component-like.
     
 0.790
Mflv_3196
Hypothetical protein.
       0.773
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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