STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_3211Permease cadmium resistance protein-like protein; KEGG: sma:SAV891 quaternary amine transporter. (255 aa)    
Predicted Functional Partners:
Mflv_3212
PFAM: regulatory protein, MerR; KEGG: cjk:jk1441 putative transcriptional regulator (MerR family).
 
     0.832
Mflv_0607
Hypothetical protein; KEGG: mva:Mvan_3642 cadmium resistance transporter.
  
     0.774
Mflv_3213
TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: cjk:jk1442 putative mercuric reductase.
 
     0.663
Mflv_3214
PFAM: alkylmercury lyase; KEGG: sep:SE0086 organomercurial lyase.
 
     0.589
Mflv_3215
Hypothetical protein.
       0.432
Mflv_3216
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
       0.432
Mflv_3217
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rxy:Rxyl_1774 cytochrome c biogenesis protein, transmembrane region.
       0.432
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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