STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_3536KEGG: mmc:Mmcs_2976 hypothetical protein. (355 aa)    
Predicted Functional Partners:
Mflv_3537
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2977 acyl-CoA dehydrogenase-like protein.
       0.773
Mflv_1669
KEGG: mmc:Mmcs_4510 transcriptional regulator, TetR family.
  
     0.611
Mflv_1103
PFAM: regulatory protein, TetR; KEGG: mva:Mvan_5713 transcriptional regulator, TetR family.
  
     0.552
Mflv_3538
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_0188 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.550
Mflv_3535
Putative adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_2975 adenylate/guanylate cyclase.
       0.535
Mflv_1760
KEGG: mmc:Mmcs_4426 hypothetical protein.
  
     0.524
Mflv_0330
KEGG: mva:Mvan_0410 conserved hypothetical protein.
 
     0.455
Mflv_4462
KEGG: mmc:Mmcs_1593 hypothetical protein.
  
     0.451
Mflv_4314
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1809 transcriptional regulator, TetR family.
  
     0.440
Mflv_0076
KEGG: mva:Mvan_0836 conserved hypothetical protein.
  
     0.421
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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