STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_4144PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1977 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (402 aa)    
Predicted Functional Partners:
Mflv_4143
PFAM: acyl-CoA thioesterase; KEGG: mmc:Mmcs_1978 acyl-CoA thioesterase.
       0.830
Mflv_0444
KEGG: mva:Mvan_0223 conserved hypothetical protein; Belongs to the CoA-transferase III family.
  
     0.766
Mflv_2126
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_4069 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
     0.747
Mflv_4367
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1759 acyl-CoA dehydrogenase-like protein.
  
 
 0.673
Mflv_4370
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1756 acyl-CoA dehydrogenase-like protein.
  
 
 0.665
Mflv_4145
PFAM: cytochrome P450; KEGG: mmc:Mmcs_2552 cytochrome P450.
       0.636
Mflv_4146
KEGG: mkm:Mkms_2596 conserved hypothetical protein.
       0.628
Mflv_4366
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_1760 transcriptional regulator, GntR family.
 
   
 0.612
Mflv_4369
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2408c 3-oxoacyl- [acyl-carrier protein] reductase.
   
 
 0.596
Mflv_4368
KEGG: mmc:Mmcs_1758 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.570
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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