STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_4462KEGG: mmc:Mmcs_1593 hypothetical protein. (129 aa)    
Predicted Functional Partners:
Mflv_4461
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mva:Mvan_1900 acyl-CoA dehydrogenase, type 2, C-terminal domain.
  
 
 0.785
Mflv_4460
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1595 putative transcriptional regulator, TetR family.
  
  
 0.642
Mflv_4027
KEGG: mmc:Mmcs_2680 hypothetical protein.
  
     0.585
Mflv_4915
KEGG: mva:Mvan_1505 conserved hypothetical protein.
  
     0.546
Mflv_4468
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_1586 acyl-CoA dehydrogenase-like protein.
  
 
 0.528
Mflv_1444
PFAM: transcription factor CarD; KEGG: mpa:MAP0475 CarD family transcriptional regulator.
  
    0.518
Mflv_3139
KEGG: mmc:Mmcs_2568 hypothetical protein.
  
     0.514
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.493
Mflv_4467
PFAM: regulatory protein, TetR; KEGG: mva:Mvan_1893 transcriptional regulator, TetR family.
  
  
 0.492
Mflv_4465
Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_1589 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
     
 0.473
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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