STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_5173PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0409 transcriptional regulator, TetR family. (194 aa)    
Predicted Functional Partners:
Mflv_0142
PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0763 transcriptional regulator, TetR family.
  
  
 0.585
Mflv_5172
PFAM: regulatory protein, TetR; KEGG: nfa:nfa1170 putative transcriptional regulator.
       0.563
Mflv_4309
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1813 transcriptional regulator, TetR family.
  
  
 0.543
Mflv_2135
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; KEGG: mva:Mvan_4569 regulatory protein GntR, HTH.
  
  
 0.489
Mflv_0186
PFAM: regulatory protein, TetR; KEGG: mva:Mvan_0719 transcriptional regulator, TetR family.
  
  
 0.485
Mflv_0013
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP0116 hypothetical protein.
  
  
 0.470
Mflv_4953
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5134 transcriptional regulator, TetR family.
  
  
 0.455
Mflv_1640
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1538 transcriptional regulator, TetR family.
  
  
 0.454
Mflv_0941
PFAM: regulatory protein, TetR; KEGG: sma:SAV882 TetR-family transcriptional regulator.
  
  
 0.453
Mflv_5238
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix, HxlR type; KEGG: rha:RHA1_ro05586 possible transcriptional regulator.
  
  
 0.453
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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