node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mvan_0002 | Mvan_0003 | Mvan_0002 | Mvan_0003 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | 0.764 |
Mvan_0002 | Mvan_0005 | Mvan_0002 | Mvan_0005 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | 0.872 |
Mvan_0002 | Mvan_0007 | Mvan_0002 | Mvan_0007 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: mmc:Mmcs_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain protein. | 0.779 |
Mvan_0002 | Mvan_3913 | Mvan_0002 | Mvan_3913 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | 0.995 |
Mvan_0002 | nucS | Mvan_0002 | Mvan_4308 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.733 |
Mvan_0002 | recF | Mvan_0002 | Mvan_0004 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.986 |
Mvan_0003 | Mvan_0002 | Mvan_0003 | Mvan_0002 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.764 |
Mvan_0003 | Mvan_0005 | Mvan_0003 | Mvan_0005 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | 0.904 |
Mvan_0003 | Mvan_0007 | Mvan_0003 | Mvan_0007 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | KEGG: mmc:Mmcs_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain protein. | 0.444 |
Mvan_0003 | recF | Mvan_0003 | Mvan_0004 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.856 |
Mvan_0005 | Mvan_0002 | Mvan_0005 | Mvan_0002 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.872 |
Mvan_0005 | Mvan_0003 | Mvan_0005 | Mvan_0003 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_0003 6-phosphogluconate dehydrogenase related protein. | 0.904 |
Mvan_0005 | Mvan_0007 | Mvan_0005 | Mvan_0007 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | KEGG: mmc:Mmcs_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain protein. | 0.651 |
Mvan_0005 | Mvan_2465 | Mvan_0005 | Mvan_2465 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | KEGG: mmc:Mmcs_2189 hypothetical protein. | 0.653 |
Mvan_0005 | Mvan_3132 | Mvan_0005 | Mvan_3132 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | 0.651 |
Mvan_0005 | Mvan_3913 | Mvan_0005 | Mvan_3913 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | 0.807 |
Mvan_0005 | Mvan_6064 | Mvan_0005 | Mvan_6064 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mmc:Mmcs_5400 integral membrane protein MviN. | 0.673 |
Mvan_0005 | nucS | Mvan_0005 | Mvan_4308 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.652 |
Mvan_0005 | rbpA | Mvan_0005 | Mvan_3417 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.655 |
Mvan_0005 | recF | Mvan_0005 | Mvan_0004 | PFAM: protein of unknown function DUF721; KEGG: mmc:Mmcs_0005 protein of unknown function DUF721; Belongs to the UPF0232 family. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.914 |