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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0010PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: mmc:Mmcs_4654 two component transcriptional regulator, LuxR family. (220 aa)    
Predicted Functional Partners:
Mvan_1357
GAF sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_1055 putative signal transduction histidine kinase.
 
 
 0.866
Mvan_5907
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sma:SAV3631 two-component system sensor kinase.
 
 
 0.864
Mvan_1647
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_0589 putative signal transduction histidine kinase.
 
 
 0.863
Mvan_2071
KEGG: tfu:Tfu_0329 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.862
Mvan_1421
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; CHASE3 domain protein; KEGG: tfu:Tfu_3046 GAF:ATP-binding region, ATPase-like.
 
 
 0.860
Mvan_4385
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mmc:Mmcs_3908 putative signal transduction histidine kinase.
 
 
 0.860
Mvan_0262
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: nfa:nfa22880 putative two-component system sensor kinase.
 
 
 0.851
Mvan_5475
Histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: nfa:nfa22360 putative two-component system sensor kinase.
 
 
 0.848
Mvan_5523
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mpa:MAP4318c hypothetical protein.
 
 
 0.831
Mvan_3991
PFAM: regulatory protein, LuxR; GAF domain protein; KEGG: tfu:Tfu_2278 regulatory protein, LuxR:response regulator receiver.
 
 
 0.786
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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