STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0035Hypothetical protein; KEGG: ana:alr4602 type I site-specific deoxyribonuclease chain S. (400 aa)    
Predicted Functional Partners:
Mvan_0034
PFAM: N-6 DNA methylase; KEGG: mbo:Mb2777c possible type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase).
 
 
 0.998
Mvan_0033
KEGG: cdi:DIP2315 hypothetical DNA-binding protein.
 
 
 0.994
Mvan_0037
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.987
Mvan_5445
PFAM: methyltransferase small; KEGG: mpa:MAP3376 modification methylase.
  
 
 0.934
Mvan_0036
PFAM: protein of unknown function DUF1016; KEGG: ava:Ava_4508 protein of unknown function DUF1016.
 
     0.738
Mvan_2383
PFAM: protein of unknown function DUF1006; KEGG: mmc:Mmcs_2114 protein of unknown function DUF1006.
  
    0.516
Mvan_0032
Transcriptional regulator, Fis family.
       0.515
Mvan_4755
KEGG: mmc:Mmcs_4342 hypothetical protein.
  
  
 0.467
Mvan_2212
PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: rha:RHA1_ro08026 RNA-directed DNA polymerase (reverse transcriptase).
 
  
 0.466
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.459
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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