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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0147PFAM: Pirin domain protein domain protein; KEGG: mmc:Mmcs_0135 pirin-like protein; Belongs to the pirin family. (255 aa)    
Predicted Functional Partners:
Mvan_0146
KEGG: mmc:Mmcs_0134 SMP-30/gluconolaconase/LRE-like region.
  
    0.862
Mvan_0148
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_0136 transcriptional regulator, MarR family.
     
 0.616
Mvan_5027
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_4461 glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.499
Mvan_4945
KEGG: mmc:Mmcs_4381 hypothetical protein.
      
 0.497
Mvan_4951
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb0935 hypothetical protein.
     
 0.488
Mvan_1931
KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein.
 
    0.465
Mvan_0099
PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: mmc:Mmcs_0084 pirin-like protein; Belongs to the pirin family.
 
    
0.436
Mvan_4995
PFAM: ABC-2 type transporter; KEGG: mpa:MAP2367c hypothetical protein.
     
 0.408
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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