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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0212PFAM: C-methyltransferase; KEGG: nha:Nham_2770 methyltransferase type 12. (359 aa)    
Predicted Functional Partners:
Mvan_0211
PFAM: glycosyl transferase, family 2; KEGG: fra:Francci3_1580 glycosyl transferase, family 2.
 
     0.818
Mvan_0207
KEGG: rha:RHA1_ro05770 hypothetical protein.
 
     0.798
Mvan_0209
PFAM: glycoside hydrolase, family 16; KEGG: bfs:BF4060 putative beta-glucanase.
 
     0.793
Mvan_0214
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: sco:SCO0395 epimerase/dehydratase.
 
     0.786
Mvan_0210
KEGG: sma:SAV6570 hypothetical protein.
       0.773
Mvan_0213
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
    0.771
Mvan_0206
KEGG: bth:BT1012 hypothetical protein.
       0.765
Mvan_0208
KEGG: rha:RHA1_ro05770 hypothetical protein.
       0.757
Mvan_0216
TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: nha:Nham_2767 nucleotidyl transferase.
 
     0.713
Mvan_0847
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mmc:Mmcs_0679 porphobilinogen synthase; Belongs to the ALAD family.
  
  
 0.586
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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