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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0261PFAM: luciferase family protein; KEGG: nfa:nfa26250 hypothetical protein. (309 aa)    
Predicted Functional Partners:
Mvan_4259
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein.
  
  
 
0.919
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.903
Mvan_3595
PFAM: luciferase family protein; KEGG: mpa:MAP1963c hypothetical protein.
  
     0.739
Mvan_5752
PFAM: luciferase family protein; KEGG: mpa:MAP0128c hypothetical protein.
  
     0.697
Mvan_4383
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3907 luciferase-like protein.
  
     0.654
Mvan_0629
PFAM: luciferase family protein; KEGG: mmc:Mmcs_0451 luciferase-like protein.
  
   
 0.634
Mvan_2616
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_2315 hypothetical protein.
  
   
 0.630
Mvan_4930
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4374 luciferase-like protein.
  
     0.629
Mvan_1187
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein.
  
   
 0.620
Mvan_1733
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_1324 LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.616
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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