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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0441PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa54300 putative short chain dehydrogenase. (261 aa)    
Predicted Functional Partners:
Mvan_0442
PFAM: monooxygenase, FAD-binding; KEGG: mtc:MT1794 hypothetical protein.
  
 
 0.807
Mvan_0440
Hypothetical protein.
       0.773
Mvan_0607
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: tma:TM1724 3-oxoacyl-(acyl carrier protein) reductase.
  
     0.767
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
 0.723
Mvan_2884
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1442 hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.684
Mvan_0267
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0271 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.656
Mvan_0443
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: aba:Acid345_0379 iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.632
Mvan_1642
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1268 short-chain dehydrogenase/reductase SDR.
 
    0.604
Mvan_0444
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_4258 protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
   0.591
Mvan_5213
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mbo:Mb3539c probable acetohydroxyacid synthase IlvX (acetolactate synthase).
 
 0.536
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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