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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0544PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_1685 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)    
Predicted Functional Partners:
Mvan_0545
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.
 
 0.982
Mvan_0483
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.974
Mvan_0487
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.974
Mvan_0488
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1642 ring hydroxylating dioxygenase, alpha subunit.
 
  
  0.967
Mvan_0470
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.
 
 0.934
Mvan_0534
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1674 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.884
Mvan_0464
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1623 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.868
Mvan_0547
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
  
 0.859
Mvan_0546
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1689 ring hydroxylating dioxygenase, alpha subunit.
 
     0.852
Mvan_4416
Benzene 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bxe:Bxe_C1196 biphenyl 2,3-dioxygenase small subunit (BphA2).
 
  
 0.782
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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