Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_0804PFAM: protein of unknown function DUF344; KEGG: mmc:Mmcs_0639 protein of unknown function DUF344. (291 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.769
Mvan_0805
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; Resolvase helix-turn-helix domain protein; KEGG: mmc:Mmcs_0640 transcriptional regulator, TetR family.
     
 0.584
Mvan_0833
PFAM: Ppx/GppA phosphatase; KEGG: mmc:Mmcs_0664 Ppx/GppA phosphatase.
 
  
 0.516
Mvan_0806
PFAM: protein of unknown function DUF445; KEGG: mmc:Mmcs_0641 protein of unknown function DUF445.
 
     0.499
Mvan_0700
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.445
Mvan_3855
Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.443
Mvan_0939
PFAM: phosphate transporter; KEGG: mmc:Mmcs_0728 phosphate transporter.
  
  
 0.422
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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