STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0812KEGG: mmc:Mmcs_0647 hypothetical protein. (290 aa)    
Predicted Functional Partners:
Mvan_0813
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mmc:Mmcs_0648 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.794
Mvan_2092
KEGG: mmc:Mmcs_1861 immunogenic protein MPB64/MPT64 precursor.
  
     0.771
Mvan_2746
KEGG: mmc:Mmcs_2450 hypothetical protein.
  
     0.770
Mvan_4438
KEGG: mmc:Mmcs_3938 putative lipoprotein LprC.
  
     0.770
Mvan_2094
PFAM: Pyrrolo-quinoline quinone; KEGG: mmc:Mmcs_1863 hypothetical protein.
  
     0.766
Mvan_5502
KEGG: mmc:Mmcs_4887 hypothetical protein.
  
     0.765
Mvan_3545
KEGG: mmc:Mmcs_3278 hypothetical protein.
  
     0.762
Mvan_0800
PFAM: acyl-ACP thioesterase; KEGG: mmc:Mmcs_0635 acyl-ACP thioesterase.
  
     0.761
lpqB
LpqB; KEGG: mmc:Mmcs_1349 LpqB.
  
     0.761
Mvan_2399
KEGG: mmc:Mmcs_2127 putative conserved membrane alanine rich protein.
  
     0.757
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.