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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0899KEGG: sma:SAV3807 lipid-transfer protein. (389 aa)    
Predicted Functional Partners:
Mvan_0915
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit.
  
 0.938
Mvan_5066
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
  
 0.938
Mvan_0902
PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0582 hypothetical protein.
 
 
 0.932
Mvan_4268
PFAM: protein of unknown function DUF35; KEGG: mpa:MAP4301c hypothetical protein.
 
 
 0.912
Mvan_0530
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_1671 protein of unknown function DUF35.
 
 
 0.894
Mvan_0898
PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_C0592 putative AMP-dependent synthetase and ligase.
  
 
 0.844
Mvan_5255
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4674 protein of unknown function DUF35.
 
 
 0.768
Mvan_0900
KEGG: sal:Sala_1006 thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
    
0.746
Mvan_5266
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_4683 enoyl-CoA hydratase/isomerase.
 
 0.725
Mvan_4138
PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein.
 
 
 0.723
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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