Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_0902PFAM: protein of unknown function DUF35; KEGG: bxe:Bxe_C0582 hypothetical protein. (140 aa)    
Predicted Functional Partners:
Mvan_5254
KEGG: mmc:Mmcs_4673 MaoC-like dehydratase.
 
 
 0.939
Mvan_0899
KEGG: sma:SAV3807 lipid-transfer protein.
 
 
 0.934
Mvan_0901
PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0606 hypothetical protein.
 
     0.889
Mvan_4311
KEGG: tfu:Tfu_1484 hypothetical protein.
 
 
 0.873
Mvan_0529
KEGG: mmc:Mmcs_5454 putative nonspecific lipid-transfer protein.
 
 
 0.870
Mvan_5253
KEGG: mmc:Mmcs_4672 lipid-transfer protein.
 
 
 0.866
Mvan_4269
KEGG: mmc:Mmcs_0041 hypothetical protein.
 
 
 0.859
Mvan_4268
PFAM: protein of unknown function DUF35; KEGG: mpa:MAP4301c hypothetical protein.
 
 
 0.849
Mvan_0900
KEGG: sal:Sala_1006 thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.809
Mvan_0530
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_1671 protein of unknown function DUF35.
  
     0.772
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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