Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_0908PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP3508 hypothetical protein. (441 aa)    
Predicted Functional Partners:
Mvan_0909
PFAM: ferredoxin; KEGG: bba:Bd0372 hypothetical protein.
 
     0.845
Mvan_0547
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1690 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.804
Mvan_0483
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.798
Mvan_0487
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1641 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.798
Mvan_4416
Benzene 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bxe:Bxe_C1196 biphenyl 2,3-dioxygenase small subunit (BphA2).
 
 
 0.798
Mvan_0534
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1674 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.797
Mvan_0540
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.784
nidB3
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1667 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.767
Mvan_0464
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1623 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.746
Mvan_0907
KEGG: mpa:MAP0779 hypothetical protein.
 
     0.644
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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