Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0909PFAM: ferredoxin; KEGG: bba:Bd0372 hypothetical protein. (113 aa)    
Predicted Functional Partners:
Mvan_0908
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpa:MAP3508 hypothetical protein.
 
     0.845
Mvan_3474
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.757
Mvan_0907
KEGG: mpa:MAP0779 hypothetical protein.
 
     0.736
Mvan_4109
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_4865 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.707
Mvan_0910
Putative methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.601
Mvan_4154
PFAM: protein of unknown function DUF35; KEGG: nph:NP2608A hydroxymethylglutaryl-CoA synthase 1.
  
     0.569
Mvan_1815
Transcriptional regulator, putative ATPase, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: mmc:Mmcs_1416 transcriptional regulator, SARP family.
  
     0.556
Mvan_0901
PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0606 hypothetical protein.
 
     0.497
Mvan_1896
KEGG: mpa:MAP3192 hypothetical protein.
  
     0.446
Mvan_0903
PFAM: Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein.
 
     0.430
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.