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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0959PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1851 hypothetical protein. (529 aa)    
Predicted Functional Partners:
Mvan_0961
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP0110 hypothetical protein.
 
  
 0.974
Mvan_0962
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP0111 hypothetical protein.
 
  
 0.973
Mvan_0963
PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1855 hypothetical protein.
 
  
 0.972
Mvan_0964
PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1856 hypothetical protein.
 
   
 0.972
Mvan_0960
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1852 hypothetical protein.
 
  
 0.966
Mvan_0957
PFAM: protein of unknown function DUF140; KEGG: mpa:MAP1849 hypothetical protein.
 
 
 0.965
Mvan_0958
PFAM: protein of unknown function DUF140; KEGG: mpa:MAP1850 hypothetical protein.
 
 
 0.946
Mvan_0965
KEGG: mpa:MAP1857 hypothetical protein.
 
    0.930
Mvan_0968
KEGG: mmc:Mmcs_0745 hypothetical protein.
 
     0.792
Mvan_2274
KEGG: mmc:Mmcs_2053 hypothetical protein.
 
     0.773
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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