Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mvan_1007Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein. (140 aa)    
Predicted Functional Partners:
Mvan_1733
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_1324 LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.778
Mvan_2936
KEGG: mmc:Mmcs_2629 hypothetical protein.
  
   
 0.771
Mvan_6045
KEGG: mpa:MAP0054c hypothetical protein.
  
   
 0.767
Mvan_5219
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4633 luciferase-like protein.
  
   
 0.752
fgd
Luciferase family protein; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
   
 0.744
Mvan_1478
PFAM: luciferase family protein; KEGG: mmc:Mmcs_1137 luciferase-like protein.
  
   
 0.732
Mvan_0629
PFAM: luciferase family protein; KEGG: mmc:Mmcs_0451 luciferase-like protein.
  
   
 0.729
Mvan_5448
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4855 luciferase-like protein.
  
   
 0.720
Mvan_4198
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein.
  
   
 0.716
fbiD
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.709
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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