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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1012PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1038 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)    
Predicted Functional Partners:
Mvan_1013
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mmc:Mmcs_1039 transcriptional regulator, AraC family.
 
     0.828
Mvan_0607
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: tma:TM1724 3-oxoacyl-(acyl carrier protein) reductase.
 
 
 0.620
Mvan_0609
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: cvi:CV1482 2,3-dihydroxybenzoate-2,3-dehydrogenase.
 
 
 0.611
Mvan_5189
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4606 short-chain dehydrogenase/reductase SDR.
 
 
 0.527
Mvan_4228
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0709 hypothetical protein.
 
 
 0.525
Mvan_5843
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0834 short-chain dehydrogenase/reductase SDR.
 
 
 0.514
Mvan_3999
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mbo:Mb1976 probable short-chain type dehydrogenase/reductase.
 
   0.513
Mvan_1011
PFAM: PE-PPE, C-terminal domain protein; KEGG: mtu:Rv0159c PE family protein.
       0.512
Mvan_2008
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: xac:XAC0353 3-alpha-hydroxysteroid dehydrogenase.
 
 
 0.483
Mvan_4963
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4407 short-chain dehydrogenase/reductase SDR.
 
 
 0.462
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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