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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1024PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein. (524 aa)    
Predicted Functional Partners:
Mvan_1023
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1437 probable ABC transporter permease.
 
 0.963
Mvan_1022
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03930 ABC dipeptide transporter, permease component.
 
 
 0.962
Mvan_1021
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sma:SAV3146 putative peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.937
Mvan_1020
KEGG: pac:PPA2156 putative peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.923
Mvan_3774
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3392 binding-protein-dependent transport systems inner membrane component.
 
 0.868
Mvan_3775
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3393 binding-protein-dependent transport systems inner membrane component.
 
 
 0.862
Mvan_0436
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2176 binding-protein-dependent transport systems inner membrane component.
 
 0.848
Mvan_0437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0598 permease of oligopeptide ABC transporter.
 
 
 0.842
Mvan_0434
KEGG: rxy:Rxyl_3024 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.840
Mvan_4431
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3929 binding-protein-dependent transport systems inner membrane component.
 
 
 0.824
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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