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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1027Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rha:RHA1_ro03793 probable transcriptional regulator, LysR family. (299 aa)    
Predicted Functional Partners:
Mvan_1029
PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: ani:AN0613.2 hypothetical protein.
 
   
 0.792
Mvan_1030
PFAM: dihydrodipicolinate synthetase; KEGG: tfu:Tfu_1718 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.788
Mvan_1028
KEGG: mmc:Mmcs_0797 hypothetical protein.
       0.773
Mvan_1031
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4783 aldehyde dehydrogenase.
 
   
 0.711
Mvan_1032
PFAM: helix-turn-helix, HxlR type; KEGG: sma:SAV520 transcriptional regulator.
  
  
 0.563
Mvan_1017
D-glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: nfa:nfa35070 putative glucarate dehydratase.
 
   
 0.487
Mvan_1420
3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
     
 0.473
Mvan_3401
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: tfu:Tfu_1423 putative transcriptional regulator.
  
     0.436
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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