STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1048PFAM: ANTAR domain protein; KEGG: mmc:Mmcs_5241 ANTAR. (207 aa)    
Predicted Functional Partners:
Mvan_1050
Response regulator receiver and ANTAR domain protein; PFAM: GAF domain protein; ANTAR domain protein; KEGG: mpa:MAP3540c hypothetical protein.
 
     0.799
Mvan_1049
PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_5240 response regulator receiver and ANTAR domain protein.
 
   
0.785
Mvan_2553
PFAM: GAF domain protein; ANTAR domain protein; KEGG: mmc:Mmcs_2237 response regulator receiver and ANTAR domain protein.
 
   
 0.775
Mvan_0652
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: sma:SAV1189 regulatory protein; TC 3.A.1.4.-.
  
 
 0.467
Mvan_2596
Urea-binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_2291 extracellular ligand-binding receptor.
  
 
 0.467
Mvan_2841
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: mmc:Mmcs_3020 extracellular ligand-binding receptor; TC 3.A.1.4.-.
  
 
 0.467
Mvan_1047
Hypothetical protein.
       0.459
Mvan_2932
KEGG: sma:SAV2761 hypothetical protein.
 
     0.452
Mvan_5694
KEGG: mmc:Mmcs_5062 hypothetical protein.
 
     0.440
Mvan_1815
Transcriptional regulator, putative ATPase, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: mmc:Mmcs_1416 transcriptional regulator, SARP family.
  
   
 0.434
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.