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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1608PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1242 transcriptional regulator, MarR family. (151 aa)    
Predicted Functional Partners:
Mvan_1607
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mmc:Mmcs_1241 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
  
  
 0.819
Mvan_1609
PFAM: putative ammonia monooxygenase; KEGG: mmc:Mmcs_1243 putative ammonia monooxygenase.
 
     0.622
Mvan_3538
KEGG: mpa:MAP1913c hypothetical protein.
   
    0.591
whiB-4
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
      
 0.564
Mvan_4874
TIGRFAM: chorismate mutase; KEGG: mmc:Mmcs_4331 chorismate mutase.
  
  
 0.557
Mvan_3563
Putative conserved integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
      
 0.525
Mvan_2356
PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_2105 transcriptional regulator, AsnC family.
   
  
 0.513
Mvan_3564
PFAM: cytochrome c oxidase, subunit II; KEGG: mbo:Mb2223c probable transmembrane cytochrome C oxidase (subunit II) CtaC.
   
  
 0.446
Mvan_3620
PFAM: protein of unknown function DUF34; KEGG: mmc:Mmcs_3344 protein of unknown function DUF34; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
     
 0.439
Mvan_1606
PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpc:RPC_2481 glucose-methanol-choline oxidoreductase.
       0.416
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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