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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1645PFAM: regulatory protein, AsnC/Lrp family; KEGG: mmc:Mmcs_1271 transcriptional regulator, AsnC family. (156 aa)    
Predicted Functional Partners:
Mvan_1652
L-lysine 6-transaminase precursor; PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_1272 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.838
Mvan_1644
PFAM: protein of unknown function DUF1338; KEGG: mbo:Mb3320 hypothetical protein.
  
    0.786
Mvan_1643
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1270 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.768
Mvan_1870
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1561 transcriptional regulator, TetR family.
   
  
 0.743
Mvan_4031
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mpa:MAP3522 OxyS_1; Belongs to the LysR transcriptional regulatory family.
   
  
 0.743
cobB-3
PFAM: Silent information regulator protein Sir2; KEGG: mmc:Mmcs_4062 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.736
Mvan_1294
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0998 transcriptional regulator, TetR family.
   
  
 0.735
Mvan_5665
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mmc:Mmcs_5038 cell envelope-related transcriptional attenuator.
  
    0.728
Mvan_5077
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4506 transcriptional regulator, TetR family.
   
  
 0.727
Mvan_0155
PFAM: regulatory proteins, IclR; KEGG: mbo:Mb1802c probable transcriptional regulatory protein.
  
  
 0.716
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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