close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1708PFAM: protein of unknown function DUF218; KEGG: nfa:nfa54230 hypothetical protein. (190 aa)    
Predicted Functional Partners:
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
 
  
 0.715
Mvan_1709
KEGG: plt:Plut_1877 hypothetical protein.
       0.709
vapC-2
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.709
Mvan_1707
PFAM: membrane-flanked domain; KEGG: mmc:Mmcs_1296 membrane-flanked domain protein.
       0.655
Mvan_3812
KEGG: mmc:Mmcs_3440 hypothetical protein.
  
     0.566
Mvan_1705
PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: mmc:Mmcs_3583 di-trans-poly-cis-decaprenylcistransferase.
     
 0.494
Mvan_1706
UDP-galactopyranose mutase; PFAM: amine oxidase; KEGG: mmc:Mmcs_3582 amine oxidase.
       0.483
Mvan_2794
KEGG: mpa:MAP1284 hypothetical protein.
  
   
 0.448
uppP
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.435
Mvan_5020
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_4454 transcriptional regulator, MarR family.
 
    0.421
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.