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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1720TIGRFAM: putative outer membrane adhesin like proteiin; 40-residue YVTN family beta-propeller repeat protein; KEGG: tcx:Tcr_0105 VCBS. (1949 aa)    
Predicted Functional Partners:
Mvan_4736
TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: mag:amb1277 RTX toxins and related Ca2+-binding protein.
  
  
 
0.927
Mvan_4699
KEGG: mmc:Mmcs_4179 hypothetical protein.
 
     0.702
Mvan_1721
KEGG: mtc:MT2625 hypothetical protein.
       0.544
Mvan_6043
KEGG: mmc:Mmcs_5378 hypothetical protein.
  
     0.433
Mvan_1445
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mmc:Mmcs_1124 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
 
  
 0.431
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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