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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1920KEGG: nfa:nfa25540 putative short chain dehydrogenase. (500 aa)    
Predicted Functional Partners:
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
 0.723
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
 
  
 0.617
Mvan_1919
Putative transcriptional regulator, MerR family; PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; KEGG: sma:SAV4657 MerR-family transcriptional regulator.
     
 0.574
Mvan_1369
PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_1069 cyclic nucleotide-binding protein.
  
 0.523
Mvan_1370
PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: nfa:nfa52860 putative two-component system sensor kinase.
  
 0.523
Mvan_2860
KEGG: mmc:Mmcs_0284 hypothetical protein.
  
 0.509
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.508
Mvan_4818
PFAM: cyclic nucleotide-binding; KEGG: mmc:Mmcs_4284 cyclic nucleotide-binding protein.
  
 0.505
Mvan_5435
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mmc:Mmcs_4818 transcriptional regulator, Crp/Fnr family.
  
 0.505
Mvan_5430
PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: mmc:Mmcs_4813 colicin V production protein.
  
 0.492
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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