Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_1925PFAM: luciferase family protein; KEGG: mtc:MT3720 luciferase-related protein. (387 aa)    
Predicted Functional Partners:
Mvan_4611
Limonene-1,2-epoxide hydrolase; PFAM: protein of unknown function DUF1486; Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein.
 
  
 0.931
Mvan_2400
PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2128 limonene-1,2-epoxide hydrolase.
     
 0.912
Mvan_0903
PFAM: Limonene-1,2-epoxide hydrolase; KEGG: nfa:nfa41920 hypothetical protein.
     
 0.902
Mvan_0357
PFAM: Limonene-1,2-epoxide hydrolase.
     
  0.900
Mvan_1926
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_2376 NAD-dependent epimerase/dehydratase.
     
 0.635
Mvan_3036
PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2753 limonene-1,2-epoxide hydrolase.
     
  0.500
Mvan_3853
Hypothetical protein.
     
  0.500
Mvan_1924
Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
       0.469
Mvan_1927
PFAM: regulatory protein, TetR; KEGG: sco:SCO0521 TetR family transcriptional regulator.
       0.465
Mvan_3157
KEGG: pol:Bpro_1912 4,5-dihydroxyphthalate decarboxylase.
 
  
 0.465
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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